謝立青
Li-Ching Hsieh

生活照

Name
謝立青
Li-Ching Hsieh
Title
助理教授
Assistant Professor
Department
基因體暨生物資訊所
Inst. of Genomics & Bioinformatics
Tel
(04)2284-0338#7091
886-4-22840338 Ext. 7091
Email
liching@dragon.nchu.edu.tw
FAX
防檢疫大樓709室
Office address
Health Insp.& Quar. Bldg. R709
論文與著作 Papers and Publications
期刊 Journal
篇名 下載
1

L.-C. Hsieh, H.-C. Lee (2002) Model for the growth of bacterial genomes. Mod. Phys. Lett. B 16: 821-827.

2

L.-C. Hsieh, L. Luo, F. Ji and H.-C. Lee (2003) Minimal model for genome evolution and growth. Phys. Rev. Lett. 90: 018101-018104.

3

T.-Y. Chen, L.-C. Hsieh, C.-H. Chang, L. Luo, F. Ji and H.-C. Lee (2004) Universal lengths in complete microbial genomes. Int. J. Mod. Phys. B 18: 2448-2454.

4

T.-Y. Chen, L.-C. Hsieh and H.-C. Lee (2005) Shannon Information and Self-similarity in whole genomes. Computer Physics Communications 169 218-221.

5

H.-D. Chen, C.-H. Chang, L.-C. Hsieh and H.-C. Lee (2005) Divergence and Shannon information in genomes. Phys. Rev. Lett. 94: 178103.

6

C.-H. Chang, L.-C. Hsieh, T.-Y. Chen, H.-D. Chen, L. Luo and H.-C. Lee (2005) Shannon information in complete genomes. J. Bioinfo. Comp. Biology 3: 587-608.

7

Y.-C. Lin*, L.-C. Hsieh*, M.-W. Kuo, J. Yu, H.-H. Kuo, W.-L. Lo, R.-J. Lin, A. L. Yu and W.-H. Li (2007) Human TRIM71 and its nematode homologue are targets of let-7 microRNA and its zebrafish orthologue is essential for development. Mol. Biol. Evol. 24: 2525-2534. (*contributed equally)

8

L.-C. Hsieh*, S.-I Lin*, A. C. Shih, J.-W. Chen, W.-Y. Lin, C.-Y. Tseng, W.-H. Li and T.-J. Chiou. (2009) Uncovering small RNA-mediated responses to phosphate-deficiency in Arabidopsis by deep sequencing. Plant Physiol. 151: 2120-2132. (*contributed equally)

9

L.-C. Hsieh*, S.-I Lin*, H.-F. Kuo and T.-J. Chiou. (2010) Abundance of tRNA-derived small RNAs in phosphate-starved Arabidopsis roots. Plant Signaling and Behavior 5:5, 1-3. (*contributed equally)

10

J.J. Emerson*, L.-C. Hsieh*, H.-M. Sung*, T.-Y. Wang*, C.-J. Huang, H.-H. Lu, M.-Y. Lu, S.-H. Wu, and W.-H. Li. (2010) Natural selection on cis and trans regulation in yeasts. Genome Research 20: 826-836. (*contributed equally)

11

B. Schaefke, J.J. Emerson, T.-Y. Wang, M.-Y. Lu, L.-C. Hsieh, W.-H. Li. (2013) Inheritance of gene expression level and selective constraints on trans- and cis-regulatory changes in yeast. Mol. Biol. Evol. 30: 2121-2133.

12

L.-C. Hsieh, C.-Y. Tseng, L. Luo, F. Ji and H.-C. Lee (2015) Evolutionary Tree Based on Oligonucleotide Frequencies and Conserved Words in 16S and 18S Ribosomal RNA. Biomed Sci. Today 2:e11-1-13.

13

C. M. Tan, C.-H. Li, N.-W. Tsao, L.-W. Su, Y.-T. Lu, S. H. Chang, Y. Y. Lin, J.-C. Liou, L.-C. Hsieh, J.-Z. Yu, C.-R. Sheue, S.-Y. Wang, C.-F. Lee and J.-Y. Yang (2016) Phytoplasma SAP11 alters 3-isobutyl-2-methoxypyrazine biosynthesis in Nicotiana benthamiana by suppressing NbOMT1. J Exp. Bot. 67 (14): 4415-4425

14

T.-Y. Huang, C.-K. Chang, Y.-F. Kao, C.-H. Chin, C.-W. Ni, H.-Y. Hsu, N.-J. Hu, L.-C. Hsieh, S.-H. Chou, I.-R. Lee, and M.-H. Hou (2017) Parity-dependent hairpin configurations of repetitive DNA sequence promote slippage associated with DNA expansion. Proc. Natl. Acad. Sci. U.S.A.114 (36): 9535-9540

15

W.-Y. Lin, Y.-Y. Lin, S.-F. Chiang, C. Syu, L.-C. Hsieh* and T.-J. Chiou* (2017) Evolution of microRNA827 targeting in the plant kingdom. New Phytologist. DOI: 10.1111/nph.14938 (*co-corresponding author)


國內、外研討會 Seminar
篇名 下載
1

L.-C. Hsieh, L. Luo, H.-C. Lee. (2003) Evidence for growth of microbial genomes by short segmental duplications. IEEE Computer Society Bioinformatics Conference (CSB'03): 474-475.

2

L. Luo, L.-C. Hsieh, F. Ji, M. Jia, H.-C. Lee. (2003) Search for evolution-related-oligonucleotides and conservative words in rRNA sequences. IEEE Computer Society Bioinformatics Conference (CSB 03): 468-469.

3

C.-H. Chang, L.-C. Hsieh, T.-Y. Chen, H.-D. Chen, L. Luo and H.-C. Lee. (2004) Shannon information in complete genomes. IEEE Computational Systems Bioinformatics Conference (CSB 04): 20-30.

4

L.-C. Hsieh, S.-I Lin, C. C. Shih, W.-H. Li and T.-J. Chiou. Uncovering small RNA-mediated responses to stress conditions by deep sequencing-based expression analysis. The 15th Joint Biophysics Conference. Taipei, Taiwan. May 19-21, 2010. (Invited Lecture)

5

T.-Y. Wang, H.-M. Sung, T.-L. Liu, L.-C. Hsieh and W.-H. Li. (2011) Trans vs. Cis Changes in Yeast Gene Expression Evolution. 2011 Annual Meeting of Society for Molecular Biology and Evolution (SMBE 2011). Kyoto, Japan. July 26-30

6

L.-C. Hsieh, Y.-C. Fang, W.-H. Li and A. C. Shih. (2012) Not Genetic Hitchhiking but Positive Selection Plays a Major Role in Influenza A Hemagglutinin Evolution. 2012 Annual Meeting of Society for Molecular Biology and Evolution (SMBE 2012). Dublin, Ireland. June 23-26

7

H.-Y. Fang, Y.-P. Hsu, H.-H. Chu and L.-C. Hsieh* (2013) Using high-throughput sequencing data to predict the transcriptional start sites of mouse microRNAs. Proceedings of the Taiwan Academic Network Conference, pp. 1029 -1034. Taichung, Taiwan. October 23-25

8

L.-C. Hsieh (2013) Identification of transcription start sites of intergenic microRNAs from high-throughput transcriptome sequencing data. International Symposium on Evolutionary Genomics and Bioinformatics 2013(ISEGB 2013). Taichung, Taiwan. November 8-9 (Invited Lecture)

9

L.-C. Hsieh (2014) Identification of Promoter regions of intergenic microRNAs from next-generation transcriptome sequencing data. Biology Inspired Theoretical Sciences Congress 2014 (BITS 2014). Taoyuan, Taiwan. June 26-28 (Invited Lecture)

10

H.-H. Chu, C.-K. Lai and L.-C. Hsieh* (2014) Identification of MicroRNA Promoters from CAGE Data and Sequence Features. 2014 International Symposium on Evolutionary Genomics and Bioinformatics (ISEGB 2014). Tainan, Taiwan. November 7-8

11

L.-C. Hsieh and C.-K. Lai (2015) Identification of chimpanzee microRNA transcription start sites and divergence of the regulation of miRNA transcription between human and chimpanzee. 2015 Annual Meeting of Society for Molecular Biology and Evolution (SMBE 2015). Vienna, Austria. June 12-16

12

H.-T. Yang, Y.-M. Hsiao and L.-C. Hsieh (2016) Identification of microRNA transcription start sites of vertebrates using RNA-seq data and sequence features. 2016 International Symposium on Evolutionary Genomics and Bioinformatics (ISEGB 2016). Kaohsiung, Taiwan. November 24-25

 

13

Y.-C. Huang, T.-H. Lee and L.-C. Hsieh (2016) Transcriptome analysis reveals the low-temperature-induced genes and pathways in brains of the brackish medaka, Oryzias dancena. 2016 International Symposium on Evolutionary Genomics and Bioinformatics (ISEGB 2016). Kaohsiung, Taiwan. November 24-25